Effect of an Abasic Site on Strand Slippage in DNA Primer-Templates
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AbstractAn abasic site is the most common lesion in DNA. It is also an intermediate product formed during base excision repair. Previously, we demonstrated that strand slippage can occur in primer-template model systems containing any kind of natural templating bases, suggesting deletion and expansion errors are possible in any kind of sequences during DNA replication. In this study, nuclear magnetic resonance spectroscopic investigations have been performed to study the intrinsic effect of a templating abasic residue on strand slippage in primer-template models. A DNA hairpin model system containing an abasic site and a 5'-overhang region was used to mimic the situation that a dNTP has just been incorporated opposite the abasic site. Our results show that, after dNTP incorporation, strand slippage occurs regardless of the type of terminal base pair formed. Compared to natural templating bases, abasic sites possess a higher slippage propensity, implicating a higher chance of expansion or deletion errors during DNA replication.
All Author(s) ListAu RY, Ng KS, Chi LM, Lam SL
Journal nameJournal of Physical Chemistry B
Year2012
Month12
Day27
Volume Number116
Issue Number51
PublisherAMER CHEMICAL SOC
Pages14781 - 14787
ISSN1520-6106
LanguagesEnglish-United Kingdom
Web of Science Subject CategoriesChemistry; Chemistry, Physical; CHEMISTRY, PHYSICAL

Last updated on 2021-14-09 at 00:18