ContigScape: a Cytoscape plugin facilitating microbial genome gap closing
Publication in refereed journal

香港中文大學研究人員

引用次數
替代計量分析
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其它資訊
摘要Background: With the emergence of next-generation sequencing, the availability of prokaryotic genome sequences is expanding rapidly. A total of 5,276 genomes have been released since 2008, yet only 1,692 genomes were complete. The final phase of microbial genome sequencing, particularly gap closing, is frequently the rate-limiting step either because of complex genomic structures that cause sequence bias even with high genomic coverage, or the presence of repeat sequences that may cause gaps in assembly.
著者Tang B, Wang Q, Yang MJ, Xie F, Zhu YQ, Zhuo Y, Wang SY, Gao H, Ding XM, Zhang LX, Zhao GP, Zheng HJ
期刊名稱BMC Genomics
詳細描述To ORKTS: URL fm P139014 record.
出版年份2013
月份4
日期30
卷號14
出版社BIOMED CENTRAL LTD
國際標準期刊號1471-2164
語言英式英語
關鍵詞ContigScape; Gap closing; Linkage; Microbial; Repeat contig; Visualization
Web of Science 學科類別Biotechnology & Applied Microbiology; BIOTECHNOLOGY & APPLIED MICROBIOLOGY; Genetics & Heredity; GENETICS & HEREDITY

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